Publications

Affiliation

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European Centre for Living Technology (ECLT),
Ca' Bottacin, Dorsoduro 3911, 30123 - Venice, Italy

Acknowledgment

If you have been involved in ECLT activities an acknowledgement to the Centre would be much appreciated.
Please use standard sentence here proposed to cite ECLT in publications:

The author(s) would like to acknowledge networking support by the European Centre for Living Technology (ECLT), Ca' Foscari University of Venice.

Latest publications

Unexpected Behavior of Chloride and Sulfate Ions upon Surface Solvation of Martian Salt Analogue

Nicolas Fauré, Jie Chen, Luca Artiglia, Markus Ammann, Thorsten Bartels-Rausch, Jun Li, Wanyu Liu, Sen Wang, Zamin A. Kanji, Jan B. C. Pettersson, Ivan Gladich, Erik S. Thomson, and Xiangrui Kong

Published by American Chemical Society, ACS Earth Space Chem. 2023

The transition from animal to human culture—simulating the social protocell hypothesis

Claes Andersson and Tamás Czárán

Published in Philosophical Transactions of the Royal Society B, Vol. 378, Issue 1872, 2023

Obstacles on the Pathway Towards Chemical Programmability Using Agglomerations of Droplets.

J.J. Schneider, A. Faggian, H.G. Matuttis, D. A. Barrow, J. Li, S. Holler, F. Casiraghi, L. Cebolla Sanahuja, Martin M. Hanczyc, P. Eschle, M. S. Weyland, D. Flumini, P. E. Hotz & Rudolf Marcel Füchslin 

Conference Paper: Artificial Life and Evolutionary Computation. WIVACE 2021.
Communications in Computer and Information Science, vol 1722. Springer, Cham.

Dynamical Criticality in Growing Networks

Cappelletti, G., D’Addese, G., Serra, R., Villani, M.

Artificial Life and Evolutionary Computation. WIVACE 2021.Communications in Computer and Information Science, vol 1722. Springer, Cham.In: Schneider, J.J., Weyland, M.S., Flumini, D., Füchslin, R.M. (eds)

A Novel Online Adaptation Mechanism in Artificial Systems Provides Phenotypic Plasticity

Braccini, M., Roli, A., Kauffman, S.


Conference Paper: Artificial Life and Evolutionary Computation. WIVACE 2021.Communications in Computer and Information Science, vol 1722. Springer, Cham.

The Good, the Bad and the Ugly: Droplet Recognition by a “Shootout”-Heuristics

Hans-Georg Matuttis, Silvia Holler, Federica Casiraghi, Johannes Josef Schneider, Alessia Faggian, Rudolf M. Füchslin & Martin M. Hanczyc


Conference Paper: Artificial Life and Evolutionary Computation. WIVACE 2021.Communications in Computer and Information Science, vol 1722. Springer, Cham.

Geometric Restrictions to the Agglomeration of Spherical Particles

Johannes Josef Schneider, David Anthony Barrow, Jin Li, Mathias Sebastian Weyland, Dandolo Flumini, Peter Eggenberger Hotz & Rudolf M. Füchslin

Conference Paper: Artificial Life and Evolutionary Computation. WIVACE 2021.Communications in Computer and Information Science, vol 1722. Springer, Cham.

Ethical Aspects of Computational Modelling in Science, Decision Support and Communication

Rudolf M. Füchslin, Jacques Ambühl, Alessia Faggian, Harold M. Fellermann, Dandolo Flumini, Armando Geller, Martin M. Hanczyc, Andreas Klinkert, Pius Krütli, Hans-Georg Matuttis, Thomas Ott, Stephan Scheidegger, Gary Bruno Schmid, Timo Smieszek, Johannes J. Schneider, Albert Steiner & Mathias S. Weyland

Conference Paper: Artificial Life and Evolutionary Computation. WIVACE 2021.Communications in Computer and Information Science, vol 1722. Springer, Cham.

Investigation of the Ramsey-Pierce-Bowman Model

Schneider, J.J., Lang, A., Hirtreiter, C., Morgenstern, I., Füchslin, R.M.

Conference Paper: Artificial Life and Evolutionary Computation. WIVACE 2021.Communications in Computer and Information Science, vol 1722. Springer, Cham.

Solvent Quality and Solvent Polarity in Polypeptides

Cedrix J. Dongmo Foumthuim and Achille Giacometti

Published in Physical Chemistry Chemical Physics, 2023.

Super-Exponential Growth in Models of a Binary String World

Marco Villani and Roberto Serra

Published in MDPI Entropy 2023, 25(1), 168.

Quantum planning for swarm robotics

Antonio Chella, Salvatore Gaglio, Maria Mannone, Giovanni Pilato, Valeria Seidita, Filippo Vella, Salvatore Zammuto

Published in Robotics and Autonomous Systems, 161, 2023

Laplacian renormalization group for heterogeneous networks

Pablo Villegas, Tommaso Gili, Guido Caldarelli & Andrea Gabrielli

Published in Nature Physics, 2023

Previous publications

Is it enough to optimize CNN architectures on ImageNet?

Lukas Tuggener, Jürgen Schmidhuber, and Thilo Stadelmann

Published in Frontiers in Computer Science, 2022

Multi-Line Customized Bus Planner for On-Demand Origin-Destination Travel Requests

Giacomo Chiarot, Claudio Silvestri

MEDES '22: Proceedings of the 14th International Conference on Management of Digital EcoSystems October 2022 Pages 84–87

Robots, cells and baroque music: Creativity as an emergent phenomenon

Andrea Roli

CEUR Workshop Proceedings Volume 3278, Pages 31 - 412022 1st Workshop on Artificial Intelligence and Creativity, CREAI 2022 Udine 28 November - 3 December 2022

Machine improvisation through generalized transition probability graphs

Mattia Barbaresi, Andrea Roli

CEUR Workshop Proceedings Volume 3278, Pages 69 - 75 2022 1st Workshop on Artificial Intelligence and Creativity, CREAI 2022 Udine 28 November - 3 December 2022

Does Creativity Help Us Survive? A Possible Approach with Quantum-Driven Robots

Maria Mannone, Valeria Seidita and Antonio Chella

CEUR Workshop Proceedings, Volume 3278, Pages 76 - 832022 1st Workshop on Artificial Intelligence and Creativity, CREAI 2022, Udine 2022

The thermodynamic origins of chiral twist in monolayer assemblies of rod-like colloids

Yawei Liu, Jared A. Wood, Achille Giacometti and Asaph Widmer-Cooper

Published in Nanoscale. The Royal Society of Chemistry 2022

A cultural evolutionary theory that explains both gradual and punctuated change

Blai Vidiella, Simon Carrignon, R. Alexander Bentley, Michael J. O’Brien and Sergi Valverde

Published in Journal of the Royal Society Interface, Vol. 19 Issue 196

Atlanta: Mathematics and Music

Maria Mannone and Mariana Montiel

Published in Journal of Mathematics and the Arts, 2022

Sonification and Clustering: a Multi-Sensory Perspective for Precision Medicine

Maria Mannone and Veronica Distefano

Published in Proceedings of the Conference on Sonification of Health and Environmental Data (SoniHED 2022)

Characterisation of the Degree of Musical non-Markovianity

Maria Mannone and Giuseppe Compagno

Published in Journal of Creative Music Systems, 2022

Sing and Measure: Sound as Voice as Quanta

Maria Mannone and Davide Rocchesso

Published in Quantum Computer Music. Springer, Cham. 2022

A simple solution to the problem of self-assembling cubic diamond crystals

Lorenzo Rovigatti, John Russo, Flavio Romano, Michael Matthies, Lukáš Kroce and Petr Šulc

Published in Nanoscale, 14(38), pp. 14268-14275, 2022

Quantum RoboSound: Auditory Feedback of a Quantum-Driven Robotic Swarm

Maria Mannone, Valeria Seidita, and Antonio Chella

IEEE International Workshop on Robot and Human Communication, 2022

Dilution of expertise in the rise and fall of collective innovation

Salva Duran-Nebreda, Michael J. O’Brien, R. Alexander Bentley & Sergi Valverde

Published in Humanities and Social Sciences Communications, Vol. 9 (2022)

The hiatus between organism and machine evolution: Contrasting mixed microbial communities with robots

Andrea Roli, Stuart A.Kauffman

Published in Biosystems, Vol. 222, (2022)

On the Criticality of Adaptive Boolean Network Robots

by Michele Braccini, Andrea Roli, Edoardo Barbieri and Stuart A. Kauffman

Published in Entropy 2022, 24(10), 1368.

Investigation of the Interaction between Human Serum Albumin and Branched Short-Chain Perfluoroalkyl Compounds

Giulia Moro, Stefano Liberi, Filippo Vascon, Sara Linciano, Sofia De Felice, Silvano Fasolato, Carlo Foresta, Luca De Toni, Andrea Di Nisio, Laura Cendron, and Alessandro Angelini

Published by American Chemical Society, 2022

Towards Parameter-Free Clustering for Real-World Data

Jian Hou, Huaqiang Yuan, Marcello Pelillo

Published in Pattern Recognition, 2022

Game-Theoretic Hypergraph Matching with Density Enhancement

Jian Hou, Huaqiang Yuan, Marcello Pelillo

Published in Pattern Recognition, 2022

FormulaNet: A Benchmark Dataset for Mathematical Formula Detection

M. Schmitt-Koopmann Felix; Elaine M. Huang; Hans-Peter Hutter; Thilo Stadelmann; Alireza Darvishy.

Published in IEEE Access, Vol. 10, 2022

Characterizing spatial point processes by percolation transitions

Pablo Villegas, Tommaso Gili, Andrea Gabrielli and Guido Caldarelli

Published in Journal of Statistical Mechanics: Theory and Experiment, Volume 2022

Bow-tie structures of twitter discursive communities

Mattia Mattei, Manuel Pratelli, Guido Caldarelli, Marinella Petrocchi & Fabio Saracco

Published in Scientific Reports, Vol. 12, Art. n: 12944 (2022)

Geolocation of Cultural Heritage usingMulti-View Knowledge Graph Embedding

Hebatallah A. Mohamed, Sebastiano Vascon, Feliks Hibraj, Stuart James, Diego Pilutti, Alessio Del Bue, and Marcello Pelillo

International Workshop on Pattern Recognition for Cultural Heritage (PatReCH 2022) |  Montréal Québec

Unsupervised Domain Adaptation for Vertebrae Detection and Identification in 3D CT Volumes Using a Domain Sanity Loss

by Pascal Sager, Sebastian Salzmann, Felice Burn, and Thilo Stadelmann

Published in Journal of Imaging 2022, 8(8), 222.

Temari Balls, Spheres, SphereHarmonic: From Japanese Folkcraft to Music

by Maria Mannone, and Takashi Yoshino

Published in Algorithms (MDPI) 2022, 15(8), 286.

Trajectory-based and sound-based medical data clustering

Maria Mannone and Veronica Distefano

BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics Northbrook Illinois August 7 - 10, 2022

Synthesis and direct assay of large macrocycle diversities by combinatorial late-stage modification at picomole scale

Sevan Habeshian, Manuel Leonardo Merz, Gontran Sangouard, Ganesh Kumar Mothukuri, Mischa Schüttel, Zsolt Bognár, Cristina Díaz-Perlas, Jonathan Vesin, Julien Bortoli Chapalay, Gerardo Turcatti, Laura Cendron, Alessandro Angelini & Christian Heinis 

Published in Nature Communications, vol. 13

Nectar of the Bots: Evolving Bidirectional Referential Communication

Ruairi Fox, Seth Bullock

Published in Sage Journals

Bicyclic peptide-based assay for uPA cancer biomarker

Giulia Moro, Patrick Severin Sfragano, Jessica Ghirardo, Ylenia Mazzocato, Alessandro Angelini, Ilaria Palchetti, Federico Polo

Published in Biosensors and Bioelectronics, Volume 213, 2022

The relationship between brand constructs and motivational patterns in crowdfunding decisions. Evidence from university crowdfunding

Fulvio Fortezza, Francesca Checchinato, Debora Slanzi

Published in Management Research Review (2022)

Molecular analysis and therapeutic applications of human serum albumin-fatty acid interactions

Sara Linciano, Giulia Moro, Alessandro Zorzi, Alessandro Angelini

Published in Journal of Controlled ReleaseVolume 348, August 2022, Pages 115-126

Hypercube + Rubik’s Cube + Music = HyperCubeHarmonic

Maria Mannone, Takashi Yoshino, Pascal Chiu, and Yoshifumi Kitamura

Published in Mathematics and Computation in Music. MCM 2022

Lecture Notes in Computer Science, vol 13267. Springer, Cham.

Some Mathematical and Computational Relations Between Timbre and Color

Maria Mannone & Juan Sebastián Arias-Valero

Published in MCM 2022: Mathematics and Computation in Music pp 127–139

Lecture Notes in Computer Science, vol 13267. Springer, Cham.

Foundations of Data Science: a comprehensive overview formed at the 1st International Symposium on the Science of Data Science

Schilling Frank-Peter, Flumini Dandolo, Füchslin Rudolf Marcel, Gavagnin Elena, Geller Armando, Quarteroni Silvia, Stadelmann Thilo

Published in Archives of Data Science, Series A

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Investing in AI for social good: an analysis of European national strategies

Francesca Foffano, Teresa Scantamburlo, and Atia Cortés

Published in AI & SOCIETY (2022)

Advanced Electrochemical and Opto-Electrochemical Biosensors for Quantitative Analysis of Disease Markers and Viruses

Najmeh Karimian, Federico Polo, and Paolo Ugo

Published in Biosensors 2022 MDPI, Vol 12 Issue 5.

Guidelines, Strategies, and Principles for the Directed Evolution of Cross-Reactive Antibodies Using Yeast Surface Display Technology

Sara Linciano, Ee Lin Wong, Ylenia Mazzocato, Monica Chinellato, Tiziano Scaravetti, Alberto Caregnato, Veronica Cacco, Zhanna Romanyuk, Alessandro Angelini

Published in Yeast Surface Display. Methods in Molecular Biology, vol 2491. Humana, New York, NY.

Transcriptomic and genomic studies classify NKL54 as a histone deacetylase inhibitor with indirect influence on MEF2-dependent transcription

Martina Minisini, Eros Di Giorgio, Emanuela Kerschbamer, Emiliano Dalla, Massimo Faggiani, Elisa Franforte, Franz-Josef Meyer-Almes, Rino Ragno, Lorenzo Antonini, Antonello Mai, Francesco Fiorentino, Dante Rotili, Monica Chinellato, Stefano Perin, Laura Cendron, Christian X Weichenberger, Alessandro Angelini, Claudio Brancolini

Published in Nucleic Acids Research, Volume 50, Issue 5 (2022)

How perfluoroalkyl substances modify fluorinated self-assembled monolayer architectures: An electrochemical and computational study

Giulia Moro, Cedrix J. Dongmo Foumthuim, Marco Spinaci, Ettore Martini, Dafne Cimino, Eleonora Balliana, Peter Lieberzeit, Flavio Romano, Achille Giacometti, Rui Campos, Karolien De Wael, Ligia Maria Moretto

Published in Analytica Chimica Acta, Volume 1204 (2022)

From multiple aspect trajectories to predictive analysis: a case study on fishing vessels in the Northern Adriatic sea

Bruno Brandoli, Alessandra Raffaetà, Marta Simeoni, Pedram Adibi, Fateha Khanam Bappee, Fabio Pranovi, Giulia Rovinelli, Elisabetta Russo, Claudio Silvestri, Amilcar Soares & Stan Matwin

Published in GeoInformatica (2022)

Liquid–Gas Interface of Iron Aqueous Solutions and Fenton Reagents

Ivan Gladich, Shuzhen Chen, Huanyu Yang, Anthony Boucly, Bernd Winter, Jeroen A. van Bokhoven, Markus Ammann, and Luca Artiglia

Published in American Chemical Society, J. Phys. Chem. Lett. 2022

Attractor-Specific and Common Expression Values in Random Boolean Network Models (with a Preliminary Look at Single-Cell Data)

Marco Villani, Gianluca D’Addese, Stuart A. Kauffman and Roberto Serra

Published in Entropy 2022, 24(3), 311; 2022

How Organisms Come to Know the World: Fundamental Limits on Artificial General Intelligence

Andrea Roli, Johannes Jaeger and Stuart A. Kauffmann
Published in Frontiers in Ecology and Evolution (2022)

Color and Timbre Gestures: An Approach with Bicategories and Bigroupoids

Maria Mannone, Giovanni Santini, Esther Adedoyin, and Carmine E. Cella

Published in Mathematics, 10 (4): 663, MDPI (2022)

Transcriptomic and genomic studies classify NKL54 as a histone deacetylase inhibitor with indirect influence on MEF2-dependent transcription

Martina Minisini, Eros Di Giorgio, Emanuela Kerschbamer, Emiliano Dalla, Massimo Faggiani, Elisa Franforte, Franz-Josef Meyer-Almes, Rino Ragno, Lorenzo Antonini, Antonello Mai, Francesco Fiorentino, Dante Rotili, Monica Chinellato, Stefano Perin, Laura Cendron, Christian X Weichenberger, Alessandro Angelini, Claudio Brancolini

Published in Nucleic Acids Research, gkac081, Oxford Academy (2022)

Structural Analysis of Human Serum Albumin in Complex with the Fibrate Drug Gemfibrozil

Stefano Liberi, Sara Linciano, Giulia Moro, Luca De Toni, Laura Cendron, and Alessandro Angelini

International Journal of Molecular Sciences, 2022, 23(3), 1769.

The impact of face image compression in future generation electronic identity documents

Calderoni Luca, Magnani Antonio

Forensic Science International: Digital Investigation 40,301345

Categories, Quantum Computing, and Swarm Robotics: A Case Study

Maria Mannone, Valeria Seidita and Antonio Chella

Published in Mathematics, Volume 10, Issue 3 (February-1 2022) MDPI

 

 

Ecological network complexity scales with area

N. Galiana, M. Lurgi, V. A. G. Bastazini, J.Bosch, L. Cagnolo, K. Cazelles, B. Claramunt-López, C. Emer, M.J. Fortin, I. Grass, C. Hernández-Castellano, F. Jauker, S. J. Leroux, K. McCann, Anne M. McLeod, D. Montoya, C. Mulder, S. Osorio-Canadas, S. Reverté, A. Rodrigo, I. Steffan-Dewenter, A. Traveset, Sergi Valverde, D. P. Vázquez, S. A. Wood, D. Gravel, T. Roslin, W. Thuiller & J. M. Montoya 

Published in Nature Ecology & Evolution (2022)

Hypergraph matching via game-theoretic hypergraph clustering

Jian Hou, Marcello Pelillo, Huaqiang Yuan

Published in Pattern Recognition, Volume 125, May 2022

 

 

Quanta in Sound, the Sound of Quanta: a Voice-Informed Quantum Theoretical Perspective on Sound 

Maria Mannone and Davide Rocchesso

Published in Quantum Computing in the Arts and Humanities, Springer, 2022

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Emergence of organisms: An exploration of the boundaries between living organisms and robots

Andrea Roli and Stuart A. Kauffman

Proceedings of the remote workshop: A quest for an interface between information and action, Gaeta, 7,9,20 April 2021 (online), Foresight

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Proteins — a celebration of consilience

Tatjana Škrbić, Trinh Xuan Hoang, Achille Giacometti, Amos Maritan and Jayanth R. Banavar

Published in International Journal of Modern Physics B (2021)

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Systemic liquidity contagion in the European interbank market

Valentina Macchiati, Giuseppe Brandi, Tiziana Di Matteo, Daniela Paolotti, Guido Caldarelli & Giulio Cimini

Published in Journal of Economic Interaction and Coordination, Springer (2021)

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Jigsaw Puzzle Solving as a Consistent Labeling Problem

Marina Khoroshiltseva, Ben Vardi, Alessandro Torcinovich, Arianna Traviglia, Ohad Ben-Shahar, Marcello Pelillo

Conference paper, CAIP 2021: Computer Analysis of Images and Patterns pp 392-402

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The World Is Not a Theorem

Stuart Kauffman and Andrea Roli

Published in MDPI Entropy 2021, 23 (11), (2021)

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Why polls fail to predict elections

Zhenkun Zhou, Matteo Serafino, Luciano Cohan, Guido Caldarelli & Hernán A. Makse 

Published in Journal of Big Data, vol. 8 (2021) 

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Bias, awareness, and ignorance in deep-learning-based face recognition

Samuel Wehrli, Corinna Hertweck, Mohammadreza Amirian, Stefan Glüge & Thilo Stadelmann

Published in AI and Ethics, Springer (2021)

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Apprendimento automatico e decisione umana

Giovanni Grandi and Teresa Scantamburlo

Book chapter in "Automi e Persone. Introduzione all’etica dell’intelligenza artificiale e della robotica"
Collana Studi Superiori, 2021 - Fossa F., Schiaffonati V., Tamburrini G.
Carocci Editore

Publisher website [ITA]

PrepNet: A Convolutional Auto-Encoder to Homogenize CT Scans for Cross-Dataset Medical Image Analysis

Mohammadreza Amirian, Javier A. Montoya-Zegarra, Jonathan Gruss, Yves D. Stebler,Ahmet Selman Bozkir, Marco Calandriz, Friedhelm Schwenkery and Thilo Stadelmann

Conference Paper · October 2021
The 2021 14th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics (CISP-BMEI 2021) Shanghai, China

Modeling the emergence of affective polarization in the social media society

Petter Törnberg, Claes Andersson, Kristian Lindgren, Sven Banisch

Published in PLoS ONE (2021)

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Reversing arrows: Duality

Maria Mannone

Published in Journal of Mathematics and the Arts (2021)

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The social turn of artificial intelligence

Nello Cristianini, Teresa Scantamburlo & James Ladyman

Published in AI & SOCIETY - Springer (2021)

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Emergent spatial patterns of coexistence in species-rich plant communities

Pablo Villegas, Tommaso Gili, and Guido Caldarelli

Published in Phys. Rev. E 104, 034305, September 2021

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Machine we trust - Perspectives on Dependable AI

Machines We Trust
Perspectives on Dependable AI

Marcello Pelillo and Teresa Scantamburlo

Published by MIT press, August 2021

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EEG based Major Depressive disorder and Bipolar disorder detection using Neural Networks:A review

Sana Yasin, Syed Asad Hussain, Sinem Aslan, Imran Raza, Muhammad Muzammel, Alice Othmani

Published in Computer Methods and Programs in Biomedicine

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Clustering Longitudinal Data with Category Theory for Diabetic Kidney Disease

Maria Mannone, Veronica DistefanoClaudio Silvestri & Irene Poli

CLADAG 2021 conference: Book of Abstracts and Short Papers, pp. 364-367 (2021)

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Categories and Clusters to investigate Similarities in Diabetic Kidney Disease Patients.


Veronica Distefano
Maria MannoneClaudio Silvestri & Irene Poli

50th Conference of the Statistics Italian Society, "Books of Short Papers" SIS 2021, pp. 1162-1167, Pearson Published in 2021

A musical reading of a contemporary installation and back: mathematical investigations of patterns in Qwalala

Maria Mannone
Published in Journal of Mathematics and Music
Mathematical and Computational Approaches to Music Theory, Analysis, Composition and Performance, 2021

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Nanocoated fiber label-free biosensing for perfluorooctanoic acid detection by lossy mode resonance

Giulia Moroa, Francesco Chiavaioli, Stefano Liberie, Pablo Zubiate, Ignacio Del Villar, Alessandro Angelini, Karolien De Wael, Francesco Baldini, Ligia Maria Moretto, Ambra Giannetti

Published in Results in Optics - Volume 5, 2021

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Exploring machine learning potential for climate change risk assessment

Federica Zennaro, Elisa Furlan, Christian  Simeoni, Silvia Torresan, Sinem Aslan, Andrea Critto, Antonio Marcomini

Published in Earth-Science Reviews, 220, art. no. 103752, 2021

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Peptide-Based Inhibitors of ADAM and ADAMTS Metalloproteinases

Stefano Pluda, Ylenia Mazzocato, Alessandro Angelini

Published in Frontiers in Molecular Biosciences, 8, art. no. 703715, 2021

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Synthesis and Antimicrobial Evaluation of Bis-morpholine Triazine Quaternary Ammonium Salts

Dr. Andrea Morandini, Benedetta Leonetti, Prof. Pietro Riello, Dr. Roberto Sole, Vanessa Gatto, Isabella Caligiuri, Prof. Flavio Rizzolio, Prof. Valentina Beghetto

Published in ChemMedChem, 2021

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Non-empirical problems in fair machine learning

Teresa Scantamburlo

Published in Ethics and Information Technology, 2021

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Covid-19 and tracing methodologies: A lesson for the future society

Teresa Scantamburlo, Atia Cortés, Pierre Dewitte, Daphné Van der Eycken, Ralf De Wolf & Marijn Martens

Published in Health and Technology, 2021

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On Randomness and Origin of Life

Roberto Serra

Published in Multiplicity and Interdisciplinarity, pp 159-166

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Encoding Brain Networks Through Geodesic Clustering of Functional Connectivity for Multiple Sclerosis Classification

Muhammad Abubakar Yamin; Paola Valsasina; Michael Dayan; Sebastiano Vascon; Jacopo Tessadori; Massimo Filippi; Vittorio Murino; Maria A. Rocca; Diego Sona

Published in IEEE Institute of Electrical and Electronics Engineers

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Algorithmic extraction of smartphone accelerometer-derived mechano-biological descriptors of resistance exercise is robust to changes in intensity and velocity

Claudio Viecelli, David Aguayo, Samuel Dällenbach, David Graf, Basil Achermann, Ernst Hafen, Rudolf M. Füchslin

Published in PLoS ONE, Volume 16, Issue 7 July, 2021

Did Human Culture Emerge in a Cultural Evolutionary Transition in Individuality?

Dinah R. Davison, Claes Andersson, Richard E. Michod & Steven L. Kuhn 

Biological Theory (2021)

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Building blocks of protein structures: Physics meets biology

Tatjana Škrbić, Amos Maritan, Achille Giacometti, George D. Rose, and Jayanth R. Banavar

Phys. Rev. E 104, 014402
Published in 2021

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Spontaneous dimensional reduction and ground state degeneracy in a simple chain model

Tatjana Škrbić, Trinh Xuan Hoang, Achille Giacometti, Amos Maritan, and Jayanth R. Banavar

Phys. Rev. E 104, L012101
Published 2021

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Flow of online misinformation during the peak of the COVID-19 pandemic in Italy

Guido Caldarelli, Rocco De Nicola, Marinella Petrocchi, Manuel Pratelli & Fabio Saracco

EPJ Data Science volume 10, Article number: 34
Published in 2021

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The AI-Atlas: Didactics for teaching AI and machine learning on-site, online, and hybrid

Thilo Stadelmann, Julian Keuzenkamp, Helmut Grabner and Christoph Würsch

Education Sciences 2021, 11(7), 318;
(This article belongs to the Special Issue Artificial Intelligence and Education
Published in 2021

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The physics of financial networks

M. Bardoscia, P. Barucca, S. Battiston, F. Caccioli, G. Cimini, D. Garlaschelli, F. Saracco,
T. Squartini and G. Caldarelli 

Nature Reviews Physics (2021)

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HELP: An LSTM-based approach to hyperparameter exploration in neural network learning

Wendi Li, Wing W.Y. Ng, Ting Wang, Marcello Pelillo, Sam Kwong

Neurocomputing, Volume 442,
28 June 2021, Pages 161-172

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Local sequence-structure relationships in proteins

Tatjana Škrbić, Amos Maritan, Achille Giacometti, Jayanth R. Banavar

Protein Science, 30 (4), pp. 818-829.
Published in 2021.

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A Fast and Effective Method to Identify Relevant Sets of Variables in Complex Systems

Gianluca D’Addese, Martina Casari, Roberto Serra, Marco Villani

Mathematics, 9(9), art. no. 1022
Published in 2021

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LiSSA: Localized Stochastic Sensitive Autoencoders

Ting Wang, Wing W. Y. Ng, Marcello Pelillo, Sam Kwong

IEEE Transactions on Cybernetics, 51(5), art. no. 8764568, pp. 2748-2760.
Published in 2021

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MetNet: A two-level approach to reconstructing and comparing metabolic networks

Nicoletta Cocco, Mercè Llabrés, Mariana Reyes-Prieto, Marta Simeoni

In PLOS ONE
Published in 2021

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Dynamical properties and path dependence in a gene-network model of cell differentiation

Michele Braccini, Andrea Roli, Marco Villani & Roberto Serra 

Soft Computing volume 25,
pages 6775–6787 (2021)

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Asymptotic information-theoretic detection of dynamical organization in complex systems

Gianluca D’Addese, Laura Sani, Luca La Rocca, Roberto Serra and Marco Villani

Entropy, 23 (4), art. no. 398
Published in 2021

Unveiling the binding mode of perfluorooctanoic acid to human serum albumin

L. Maso, M. Trande, S.o Liberi, G. Moro, E. Daems, S.a Linciano, F. Sobott, S. Covaceuszach, A. Cassetta, S. Fasolato, L. M. Moretto, K. De Wael, L. Cendron, A. Angelini 

Protein Science, 30 (4), pp. 830-841.
Published in 2021.

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Native mass spectrometry for the design and selection of protein bioreceptors for perfluorinated compounds

E. Daems, G. Moro, H. Berghmans, L.M. Moretto, S. Dewilde, A. Angelini, F. Sobott, K. De Wael

Analyst, 146 (6), pp. 2065-2073
Published in 2021

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Phase behavior of hard cylinders

Joyce T. Lopes, Flavio Romano, Eric Grelet, Luís F. M. Franco and Achille Giacometti

J. Chem. Phys. 154, 104902
Published in 2021

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Mesoporous zirconia nanoparticles as drug delivery systems: Drug loading, stability and release

Leonetti, B., Perin, A., Ambrosi, E.K., Sponchia, G., Sgarbossa, P., Castellin, A., Riello, P., Scarso, A.

Journal of Drug Delivery Science and Technology, 61, art. no. 102189.
Published in 2021

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True scale-free networks hidden by finite size effects

Serafino, M., Cimini, G., Maritan, A., Rinaldo, A., Suweis, S., Banavar, J.R., Caldarelli, G.

Proceedings of the National Academy of Sciences of the United States of America, 118 (2),
Published in 2021

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A Neural Network Model for Lead Optimization of MMP12 Inhibitors

Dagnew, T.M., Silvestri, C., Slanzi, D., Poli, I.

Lecture Notes in Computer Science
(including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 12664 LNCS, pp. 323-335
Published in 2021

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Computational pipeline to probe NaV1.7 gain-of-function variants in neuropathic painful syndromes

Alberto A. Toffano, Giacomo Chiarot, Stefano Zamuner, Margherita Marchi, Erika Salvi, Stephen G. Waxman, Catharina G. Faber, Giuseppe Lauria, Achille Giacometti and Marta Simeoni 

Scientific Reports volume 10,
Article number: 17930 (2020)

Published in 2020

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Can the roles of polar and non-polar moieties be reversed in non-polar solvents?

Cedrix J Dongmo Foumthuim, Manuel Carrer, Maurine Houvet, Tatjana Škrbić, Giuseppe Graziano, Achille Giacometti
Phys Chem Chem Phy, 2020 Nov 18;
22(44):25848-25858
Published in 2020

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An integrated DEM–FEM approach to study breakage in packing of glass cartridges on a conveyor belt

Daniela Paola Boso, Tommaso Braga, Simone Ravasini, Tatjana Škrbić, Andrea Puglisi, Odra Pinato, Alberto Chillon, Maria Chiara Frare & Achille Giacometti

Granular Matter volume 22,
Article number: 73 (2020) 

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How (Not) to Measure Bias in Face Recognition Networks

Stefan Glüge, Mohammadreza Amirian, Dandolo Flumini, and Thilo Stadelmann

In Proceedings of the 9th IAPR TC 3 Workshop on Artificial Neural Networks for Pattern Recognition (ANNPR’20), Springer, LNAI, pp. 125-137
Published in 2020

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Combining Reinforcement Learning with Supervised Deep Learning for Neural Active Scene Understanding

Dano Roost, Ralph Meier, Giovanni Toffetti Carughi, and Thilo Stadelmann

In Proceedings of the Active Vision and Perception in Human(-Robot) Collaboration Workshop at IEEE RO-MAN 2020 (AVHRC’20)
Published in 2020

Can Polarity-Inverted Surfactants Self-Assemble in Nonpolar Solvents?

Manuel Carrer, Tatjana Škrbić, Sigbjørn Løland Bore, Giuseppe Milano, Michele Cascella and Achille Giacometti

The Journal of Physical Chememistry B 2020
124, 29, 6448–6458
Published in 2020

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Design Patterns for Resource-Constrained Automated Deep-Learning Methods

Lukas Tuggener, Mohammadreza Amirian, Fernando Benites, Pius von Däniken, Prakhar Gupta, Frank-Peter Schilling, and Thilo Stadelmann

In AI (section “Intelligent Systems: Theory and Applications”)", Springer, LNAI, 1(4):510-538
Published in 2020

Macrocycle synthesis strategy based on step-wise "adding and reacting" three components enables screening of large combinatorial libraries

Mothukuri G.K., Kale S.S., Stenbratt C.L., Zorzi A., Vesin J., Bortoli Chapalay J., Deyle K., Turcatti G., Cendron L., Angelini A. and C. Heinis 

In Chemical Science, 11, 7858-63
Published in 2020

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Restricted clonality and limited germinal center reentry characterize memory B cell reactivation by boosting

Mesin L., Schiepers A., Ersching J., Barbulescu A., Battaglioni Cavazzoni C., Angelini A., Okada T., Kurosaki T. and G. D. Victora 

In Cell, 180, 92-106
Published in 2020

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Evolving always‐critical networks

Villani, M., Magri, S., Roli, A., & Serra, R.

In LIFE, 10, 1–20
Published in 2020

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Two sides of the same coin: Improved ancient coin classification using Graph Transduction Games

Aslan, S., Vascon, S., & Pelillo, M. 

In Pattern Recognition Letters, vol 131, pp. 158-165
Published in 2020

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Benchmarking algorithms for food localization and semantic segmentation

Aslan, S., Ciocca, G., Mazzini, D., & Schettini, R. 

In International Journal of Machine Learning and Cybernetics, pp.1-21
Published in 2020

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Adsorption and Isomerization of Glyoxal and Methylglyoxal at the Air/Hydroxylated Silica Surface Silica

I.Gladich, M. A. Carignano and J.S. Francisco

In JCP, 152,164702
Published in 2020

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Hydration, Solvation and Isomerization of Methylglyoxal at the Air/Water Interface: New Mechanistic Pathways

C. Zhu, X. C. Zeng, J.S. Francisco, I. Gladich

In JACS, 142, 12, 5574-5582
Published in 2020

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Solvation and Stabilization of Single Strand RNA at the Air/Ice Interface Support a Primordial RNA World on Ice

Ivan Gladich, Margaret L. Berrens, Penny M. Rowe, Rodolfo G. Pereyra, and Steven Neshyba

In JPC-C, 124, 34, 18587–18594
Published in 2020

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Covalent immobilization of delipidated human serum albumin on poly(pyrrole-2-carboxylic) acid film for the impedimetric detection of perfluorooctanoic acid

Moro G., Bottari F., Liberi S., Covaceuszach S., Cassetta A., Angelini A., De Wael K. and L.M. Moretto 

In Bioelectrochemistry, 134, 107540
Published in 2020

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Introducing PIONEER: a project to harness big data in prostate cancer research

Omar, M.I., Roobol, M.J., Ribal, M.J., Thomas Abbott, Paul- Michael Agapow , Sonia Araujo, Alex Asiimwe , Charles Auffray , Irina Balaur , Katharina Beyer, Chiara Bernini, Anders Bjartell, Alberto Briganti, John- Edward Butler- Ransohoff, Riccardo Campi , Marinel Cavelaars, Bertrand De Meulder, Doron Lancet, Kees van Bochove , Femke van Diggelen, Mieke Van Hemelrijck, Hein Van Poppel , Jihong Zong, James N’Dow and The PIONEER Consortium (2020)

In Nat Rev Urol 17, 351–362
Published in 2020

A unified nomenclature for vertebrate olfactory receptors

T Olender, TEM Jones, E,  Bruford and D Lancet

BMC evolutionary biology 20, 1-12
Published in 2020

COVID-19 and beyond: a call for action and audacious solidarity to all the citizens and nations, it is humanity’s fight

Charles Auffray, Niklas Blomberg, Myrna Bonaldo, Bertrand Boutron, Samir Brahmachari, Christian Bréchot, Alfredo Cesario, Sai-Juan Chen, Karine Clément, Daria Danilenko, Alberto Di Meglio, Andrea Gelemanovic, Carole Goble, Takashi Gojobori, Jason D Goldman, Michel Goldman, Yi-Ke Guo, James Heath, Leroy Hood, Peter Hunter, Li Jin, Doron Lancet, Emiel Wouters

Soc Sci Res Network
Published in 2020

Emergence of Organisms

Roli, A., & Kauffman, S.

In Entropy, 22, 1163–1174
Published in 2020

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The Detection of Dynamical Organization in Cancer Evolution Models

Sani L., D’Addese G., Graudenzi A., Villani M.

In Artificial Life and Evolutionary Computation. WIVACE 2019, vol. 1200
Published in 2020

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Selecting for Positive Responses to Knock Outs in Boolean Networks

Villani M., Magrì S., Roli A., Serra R.

In Artificial Life and Evolutionary Computation. WIVACE 2019, vol. 1200
Published in 2020

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The effects of a simplified model of chromatin dynamics on attractors robustness in random boolean networks with self-loops: An experimental study

Braccini, M.; Roli, A.; Villani, M.; Montagna, S.; Serra, R.

In Artificial Life and Evolutionary Computation. WIVACE 2019, vol. 1200
Published in 2020

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Avalanches of perturbations in modular gene regulatory networks  

Vezzani, A.; Villani, M.; Serra, R.

In Artificial Life and Evolutionary Computation. WIVACE 2019, vol. 1200
Published in 2020

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Spread and dynamics of the COVID-19 epidemic in Italy: Effects of emergency containment measures

Gatto, M., Bertuzzo, E., Mari, L., Miccoli, S., Carraro, L., Casagrandi, R., & Rinaldo, A.

In Proceedings of the National Academy of Sciences, 117(19), 10484-10491
Published in 2020

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The geography of COVID-19 spread in Italy and implications for the relaxation of confinement measures

Bertuzzo, E., Mari, L., Pasetto, D., Miccoli, S., Casagrandi, R., Gatto, M., & Rinaldo, A.

In Nature Communications, 11, Article number: 4264
Published in 2020

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Local stakeholders’ narratives about large-scale urban development: The Zhejiang Hangzhou Future Sci-Tech City

Anzoise,V., Slanzi, D., Poli, I.

In Urban Studies, 57, 655-671
Published in 2020

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Multi-scenario analysis in the Adriatic Sea: A GIS-based Bayesian network to support maritime spatial planning

Furlan, E., Slanzi, D., Torresan, S., Critto, A., Marcomini, A. Furlan, E., Slanzi, D., Torresan, S., Critto, A., Marcomini, A. 

In Science Of The Total Environment, 703, article number: 134972
Published in 2020

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